Nicotiana tabacumAssembly Name:Ntab-TN90
Gene File:GCF_000715135.1_Ntab-TN90_protein.faa.gz
| Position on the Genome | Gene Name | CDS | lcl|NW_015842029.1_cds_XP_016508224.1_21270 |
| PEP | XP_016508224.1 |
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| Position on the Genome | Chromosome | NW_015842029.1 | |
| Start Position | 54511 | ||
| End Position | 59802 | ||
| Strand | + | ||
| Annotation (Hayai Annotation ZEN) |
KusakiDB | KusakiDB Accession | KUNI00141165 |
|---|---|---|---|
| KusakiDB version | 2.0 | ||
| Evidence is present | Yes | ||
| Databases intersection (the sequence exists in multiple databases) | orthodb-refseq-uniprot |
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| OrthoDB | Database version | 10.1 | |
| Description | High mobility group box domain |
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| Gene ID | |||
| Ortholog group unique ID | |||
| Functional annotation | Source DB | trembl |
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| Protein name | RING-type E3 ubiquitin transferase |
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| Accession | |||
| CrossRef Refseq from UniProt | |||
| EC | |||
| KEGG entry | NA |
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| KO ID | NA |
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| Pfam ID | PF03145,PF00505,PF10536 |
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| Pfam Description | Details | ||
| InterPro ID | IPR013083,IPR019557,IPR036910,IPR013010,IPR008974,IPR018121,IPR009071 |
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| InterPro Description | Details | ||
| GO ID | GO:0016567,GO:0005634,GO:0003677,GO:0006511,GO:0016740,GO:0008270,GO:0007275,GO:0005737 |
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| GO Description | Details | ||
| GOslim ID | GO:0032502,GO:0016740,GO:0003676,GO:0005737,GO:0006508,GO:0006464,GO:0043167,GO:0032501,GO:0009057,GO:0005634 |
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| GO slim Description | Details | ||
| Transcription Factor (TF) family | NA |
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| TF family Description | NA |
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| Best hit taxonomy | Species | Nicotiana sylvestris | |
| Family | Solanaceae | ||
| Phylum | Streptophyta | ||
| Superkingdom | Eukaryota | ||
| Comments | |||
